If you revoked from shop_manage role some capability, this change is permanent. It does not depend from the presence of User Role Editor Pro at your site. You may grant it back manually to solve this.
WooCommerce->Reports menu is protected by ‘view_woocommerce_reports’ capability.
WooCommerce->Orders menu is protected by ‘edit_shop_orders’ capability.
If role can these capabilities but still can not access these menu items, and URE deactivation does not help, that is you don’t apply some restriction via URE’s additional modules, then some another plugin may be involved. Try to deactivate all plugins except WooCommerce and test. If that helps, activate plugins back one by one to isolate a reason.